Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR001641 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR001641 |
KEGG Orthology
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 79265082-79267417 |
| Nucleotide length: | 2335 |
| Prodicted protein length: | 335 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 2 | 330 | GO:0008168 |
| Pfam | SAM dependent carboxyl methyltransferase | 20 | 332 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR042086 | Gene3D | 129 | 316 | Methyltransferase, alpha-helical capping domain |
| IPR029063 | SUPERFAMILY | 1 | 332 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR005299 | PANTHER | 2 | 330 | SAM dependent carboxyl methyltransferase |
| IPR005299 | Pfam | 20 | 332 | SAM dependent carboxyl methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256070 | 99.504 | 1008 | 0.0 |
| XM_028256069 | 99.504 | 1008 | 0.0 |
| XM_028209955 | 96.23 | 1008 | 0.0 |
| JX647693 | 99.227 | 388 | 0.0 |
| JX647693 | 100 | 350 | 0.0 |
| JX647693 | 100 | 276 | 5.45e-140 |
| JX647694 | 97.165 | 388 | 0.0 |
| JX647694 | 96.286 | 350 | 1.90e-159 |
| JX647694 | 95.652 | 276 | 5.60e-120 |
| EF526217 | 95.668 | 277 | 5.60e-120 |
| JX647690 | 95.668 | 277 | 5.60e-120 |
| XM_028268338 | 97.248 | 109 | 3.75e-42 |
| XM_028268336 | 97.248 | 109 | 3.75e-42 |
| XM_028268335 | 97.248 | 109 | 3.75e-42 |
| XM_028268333 | 97.248 | 109 | 3.75e-42 |
| XM_028268334 | 97.727 | 88 | 3.80e-32 |
| XM_028268332 | 97.727 | 88 | 3.80e-32 |
| XM_028268331 | 97.727 | 88 | 3.80e-32 |