Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR001643 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR001643 |
KEGG Orthology
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 79333823-79334236 |
| Nucleotide length: | 413 |
| Prodicted protein length: | 137 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | SAM dependent carboxyl methyltransferase | 20 | 133 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 1 | 132 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR029063 | SUPERFAMILY | 2 | 134 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR005299 | Pfam | 20 | 133 | SAM dependent carboxyl methyltransferase |
| IPR005299 | PANTHER | 1 | 132 | SAM dependent carboxyl methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| JX647692 | 99.275 | 414 | 0.0 |
| AB362883 | 97.409 | 386 | 0.0 |
| AB362885 | 95.596 | 386 | 3.38e-173 |
| AB297451 | 95.065 | 385 | 3.41e-168 |
| XM_028268338 | 95.413 | 109 | 3.17e-39 |
| XM_028268336 | 95.413 | 109 | 3.17e-39 |
| XM_028268335 | 95.413 | 109 | 3.17e-39 |
| XM_028268333 | 95.413 | 109 | 3.17e-39 |
| XM_028268334 | 96.591 | 88 | 6.90e-31 |
| XM_028268332 | 96.591 | 88 | 6.90e-31 |
| XM_028268331 | 96.591 | 88 | 6.90e-31 |