Data Related Infomation

Camellia sinensis var. sinensis cv. Biyun                  GWHPAMJR002953                   SCAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   GWHPAMJR002953

KEGG Orthology

K01859  

Gene Family

Chalcone,Chalcone_2

Gene Attributes

Chromosome:GWHAMJR00000317
Cds Coordinates:193617089-193621241
Nucleotide length:4152
Prodicted protein length:205

Gene Ontology Classification

Database Annotation Match Start Match End GO
PfamChalcone-flavanone isomerase4201GO:0016872
SUPERFAMILYChalcone isomerase2204GO:0016872

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR016087Pfam4201Chalcone isomerase
IPR016089Gene3D48201Chalcone isomerase, orthogonal bundle domain superfamily
IPR036298SUPERFAMILY2204Chalcone isomerase superfamily
IPR016088Gene3D16180Chalcone isomerase, 3-layer sandwich
IPR044191PANTHER1205Chalcone--flavonone isomerase 3-like

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_0282144401006180.0
KY61568699.8386180.0
MG72078298.226180.0
MG72077698.0586180.0
MG72078497.7316170.0
MG72078397.4116180.0
MG72077997.4116180.0
MG72077797.4116180.0
MG72077897.2496180.0
MG72078597.0876180.0
MG72078097.0876180.0
MG72078196.7646180.0
XM_02827042697.9342425.67e-113
XM_02823260398.0771561.68e-68