Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR003130 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR003130 |
KEGG Orthology
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 207345076-207347232 |
| Nucleotide length: | 2156 |
| Prodicted protein length: | 168 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | SAM dependent carboxyl methyltransferase | 2 | 82 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 4 | 81 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 81 | 168 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005299 | Pfam | 2 | 82 | SAM dependent carboxyl methyltransferase |
| IPR005299 | PANTHER | 4 | 81 | SAM dependent carboxyl methyltransferase |
| IPR005299 | PANTHER | 81 | 168 | SAM dependent carboxyl methyltransferase |
| IPR042086 | Gene3D | 85 | 167 | Methyltransferase, alpha-helical capping domain |
| IPR029063 | SUPERFAMILY | 2 | 168 | S-adenosyl-L-methionine-dependent methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN163831 | 96.324 | 272 | 7.57e-121 |
| AB207816 | 95.572 | 271 | 5.89e-117 |
| AB207816 | 95.547 | 247 | 7.73e-106 |
| MN163830 | 95.221 | 272 | 7.62e-116 |
| XM_028256070 | 95.221 | 272 | 7.62e-116 |
| XM_028256069 | 95.221 | 272 | 7.62e-116 |
| KT215398 | 95.221 | 272 | 7.62e-116 |
| XM_028205684 | 95.203 | 271 | 2.74e-115 |
| AB207818 | 95.203 | 271 | 2.74e-115 |
| AB207818 | 95.951 | 247 | 1.66e-107 |
| AB031281 | 95.203 | 271 | 2.74e-115 |
| AB031281 | 95.547 | 247 | 7.73e-106 |
| JX647693 | 96.154 | 260 | 9.86e-115 |
| JX647691 | 96.139 | 259 | 3.55e-114 |
| JX647691 | 95.547 | 247 | 7.73e-106 |
| XM_028247252 | 95.402 | 261 | 5.93e-112 |
| JX647695 | 95.736 | 258 | 5.93e-112 |
| JX647695 | 95.951 | 247 | 1.66e-107 |
| JX647694 | 95.385 | 260 | 2.13e-111 |
| XM_028205701 | 95.547 | 247 | 7.73e-106 |
| XM_028205740 | 96.356 | 247 | 3.57e-109 |
| AB056108 | 95.142 | 247 | 3.60e-104 |
| AB207817 | 95.142 | 247 | 3.60e-104 |
| XM_028211977 | 95.142 | 247 | 3.60e-104 |
| XM_028226211 | 95.522 | 134 | 2.32e-51 |
| FJ554589 | 96.818 | 220 | 1.69e-97 |
| XM_028268989 | 97.037 | 135 | 2.98e-55 |