Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR003134 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR003134 |
KEGG Orthology
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 207562729-207565125 |
| Nucleotide length: | 2396 |
| Prodicted protein length: | 249 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | SAM dependent carboxyl methyltransferase | 99 | 246 | GO:0008168 |
| Pfam | SAM dependent carboxyl methyltransferase | 20 | 83 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 99 | 241 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 2 | 97 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR042086 | Gene3D | 109 | 230 | Methyltransferase, alpha-helical capping domain |
| IPR005299 | Pfam | 99 | 246 | SAM dependent carboxyl methyltransferase |
| IPR005299 | Pfam | 20 | 83 | SAM dependent carboxyl methyltransferase |
| IPR029063 | SUPERFAMILY | 1 | 246 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR005299 | PANTHER | 99 | 241 | SAM dependent carboxyl methyltransferase |
| IPR005299 | PANTHER | 2 | 97 | SAM dependent carboxyl methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| AB207816 | 97.925 | 482 | 0.0 |
| AB207816 | 98.134 | 268 | 2.45e-127 |
| XM_028205701 | 97.718 | 482 | 0.0 |
| XM_028205701 | 98.507 | 268 | 5.26e-129 |
| XM_028205684 | 97.303 | 482 | 0.0 |
| XM_028205684 | 96.269 | 268 | 5.33e-119 |
| AB031281 | 97.303 | 482 | 0.0 |
| AB031281 | 96.642 | 268 | 1.15e-120 |
| AB207818 | 97.095 | 482 | 0.0 |
| AB207818 | 97.744 | 266 | 1.47e-124 |
| AY907710 | 96.888 | 482 | 0.0 |
| AY907710 | 96.642 | 268 | 1.15e-120 |
| XM_028226209 | 96.266 | 482 | 0.0 |
| MN163831 | 95.436 | 482 | 0.0 |
| MN163830 | 95.021 | 482 | 0.0 |
| XM_028247252 | 95.021 | 482 | 0.0 |
| KT215398 | 95.021 | 482 | 0.0 |
| AB297451 | 96.255 | 267 | 1.92e-118 |
| HM003356 | 97.101 | 414 | 0.0 |
| AB362882 | 95.131 | 267 | 1.93e-113 |
| AB362884 | 95.131 | 267 | 1.93e-113 |
| JX647691 | 97.714 | 350 | 6.43e-168 |
| JX647691 | 96.642 | 268 | 1.15e-120 |
| JX647691 | 96.296 | 135 | 7.56e-53 |
| JX647695 | 96.264 | 348 | 1.81e-158 |
| JX647695 | 97.037 | 135 | 1.63e-54 |
| JX647694 | 95.143 | 350 | 6.57e-153 |
| XM_028205740 | 96.141 | 311 | 5.18e-139 |
| XM_028205740 | 96.269 | 268 | 5.33e-119 |
| XM_028268989 | 97.015 | 268 | 2.46e-122 |
| FJ554589 | 95.896 | 268 | 2.48e-117 |
| XM_028226210 | 96.296 | 135 | 7.56e-53 |
| XM_028211977 | 96.154 | 130 | 1.27e-50 |
| XM_028211977 | 96.33 | 109 | 4.62e-40 |
| XM_028268334 | 96.591 | 88 | 1.30e-30 |
| XM_028268332 | 96.591 | 88 | 1.30e-30 |
| XM_028268331 | 96.591 | 88 | 1.30e-30 |