Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR003135 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR003135 |
KEGG Orthology
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 207642074-207648330 |
| Nucleotide length: | 6256 |
| Prodicted protein length: | 365 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 3 | 359 | GO:0008168 |
| Pfam | SAM dependent carboxyl methyltransferase | 51 | 362 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005299 | PANTHER | 3 | 359 | SAM dependent carboxyl methyltransferase |
| IPR005299 | Pfam | 51 | 362 | SAM dependent carboxyl methyltransferase |
| IPR042086 | Gene3D | 8 | 346 | Methyltransferase, alpha-helical capping domain |
| IPR029063 | SUPERFAMILY | 4 | 362 | S-adenosyl-L-methionine-dependent methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| AB031281 | 99.089 | 1098 | 0.0 |
| AY907710 | 98.816 | 1098 | 0.0 |
| AB207816 | 98.814 | 1096 | 0.0 |
| XM_028205684 | 98.725 | 1098 | 0.0 |
| AB207818 | 98.725 | 1098 | 0.0 |
| XM_028226209 | 95.719 | 1098 | 0.0 |
| XM_028205701 | 96.805 | 1033 | 0.0 |
| AB056108 | 95.05 | 1091 | 0.0 |
| XM_028256069 | 96.104 | 77 | 2.52e-24 |
| XM_028205740 | 96.224 | 927 | 0.0 |
| XM_028226210 | 95.606 | 751 | 0.0 |
| XM_028211977 | 97.358 | 492 | 0.0 |
| HM003356 | 98.792 | 414 | 0.0 |
| JX647691 | 98.063 | 413 | 0.0 |
| JX647691 | 98.857 | 350 | 2.04e-174 |
| JX647691 | 99.275 | 276 | 1.29e-136 |
| JX647691 | 100 | 78 | 6.95e-30 |
| FJ554589 | 98.404 | 376 | 0.0 |
| XM_028268989 | 99.18 | 366 | 0.0 |
| JX647695 | 95.977 | 348 | 1.25e-156 |
| JX647695 | 97.464 | 276 | 2.81e-128 |
| JX647693 | 96.104 | 77 | 2.52e-24 |
| EF526217 | 97.101 | 276 | 1.31e-126 |
| JX647690 | 97.101 | 276 | 1.31e-126 |
| XM_028268334 | 95.146 | 103 | 1.92e-35 |
| XM_028268332 | 95.146 | 103 | 1.92e-35 |
| XM_028268331 | 95.146 | 103 | 1.92e-35 |