Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR003137 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR003137 |
KEGG Orthology
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 207925912-207933932 |
| Nucleotide length: | 8020 |
| Prodicted protein length: | 318 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | SAM dependent carboxyl methyltransferase | 152 | 315 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 152 | 312 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005299 | Pfam | 152 | 315 | SAM dependent carboxyl methyltransferase |
| IPR042086 | Gene3D | 178 | 299 | Methyltransferase, alpha-helical capping domain |
| IPR005299 | PANTHER | 152 | 312 | SAM dependent carboxyl methyltransferase |
| IPR029063 | SUPERFAMILY | 152 | 315 | S-adenosyl-L-methionine-dependent methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028247252 | 99.197 | 498 | 0.0 |
| KT215398 | 96.245 | 506 | 0.0 |
| KT215397 | 95.85 | 506 | 0.0 |
| MN163831 | 95.652 | 506 | 0.0 |
| XM_028228398 | 95.455 | 506 | 0.0 |
| KT215399 | 95.455 | 506 | 0.0 |
| AB207816 | 95.257 | 506 | 0.0 |
| MN163830 | 95.059 | 506 | 0.0 |
| AB031280 | 95.059 | 506 | 0.0 |
| JX647690 | 95.143 | 350 | 8.46e-153 |
| JX647690 | 96.226 | 159 | 5.74e-65 |
| EF526217 | 95.143 | 350 | 8.46e-153 |
| EF526217 | 96.226 | 159 | 5.74e-65 |
| XM_028211977 | 96.154 | 130 | 5.86e-50 |
| XM_028250806 | 95.918 | 49 | 1.72e-10 |