Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR003138 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR003138 |
KEGG Orthology
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 208082774-208084905 |
| Nucleotide length: | 2131 |
| Prodicted protein length: | 156 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | SAM dependent carboxyl methyltransferase | 2 | 82 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 4 | 81 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 81 | 155 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005299 | Pfam | 2 | 82 | SAM dependent carboxyl methyltransferase |
| IPR005299 | PANTHER | 4 | 81 | SAM dependent carboxyl methyltransferase |
| IPR005299 | PANTHER | 81 | 155 | SAM dependent carboxyl methyltransferase |
| IPR042086 | Gene3D | 85 | 155 | Methyltransferase, alpha-helical capping domain |
| IPR029063 | SUPERFAMILY | 2 | 155 | S-adenosyl-L-methionine-dependent methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028211977 | 100 | 247 | 3.23e-124 |
| JX647691 | 97.166 | 247 | 1.52e-112 |
| JX647691 | 97.309 | 223 | 7.19e-101 |
| AB031281 | 97.166 | 247 | 1.52e-112 |
| AB031281 | 96.17 | 235 | 5.56e-102 |
| JX647695 | 96.761 | 247 | 7.09e-111 |
| JX647695 | 96.38 | 221 | 2.01e-96 |
| AB207818 | 96.761 | 247 | 7.09e-111 |
| AB207818 | 96.17 | 235 | 5.56e-102 |
| XM_028205740 | 96.356 | 247 | 3.30e-109 |
| XM_028205684 | 96.356 | 247 | 3.30e-109 |
| XM_028205684 | 96.17 | 235 | 5.56e-102 |
| AB207816 | 96.356 | 247 | 3.30e-109 |
| AB207816 | 96.596 | 235 | 1.19e-103 |
| XM_028205701 | 95.547 | 247 | 7.14e-106 |
| XM_028205701 | 95.745 | 235 | 2.59e-100 |
| AY907710 | 95.547 | 247 | 7.14e-106 |
| AY907710 | 95.319 | 235 | 1.20e-98 |
| XM_028226211 | 95.142 | 247 | 3.32e-104 |
| XM_028226210 | 95.142 | 247 | 3.32e-104 |
| XM_028226209 | 95.142 | 247 | 3.32e-104 |
| XM_028226209 | 95.319 | 235 | 1.20e-98 |
| KT215397 | 95.142 | 247 | 3.32e-104 |
| AB362884 | 95.142 | 247 | 3.32e-104 |
| AB207817 | 95.142 | 247 | 3.32e-104 |
| AB056108 | 95.142 | 247 | 3.32e-104 |
| HM003356 | 95.745 | 235 | 2.59e-100 |
| FJ554589 | 96.33 | 218 | 9.37e-95 |
| XM_028268989 | 97.037 | 135 | 2.76e-55 |