Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR003208 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | UDP-glucuronosyl/UDP-glucosyltransferase |
| Locus Name: | GWHPAMJR003208 |
Gene Family
UDPGT,Dimer_Tnp_hAT
Gene Attributes
| Chromosome: | GWHAMJR00000317 |
| Cds Coordinates: | 212150279-212152231 |
| Nucleotide length: | 1952 |
| Prodicted protein length: | 505 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | hAT family C-terminal dimerisation region | 77 | 166 | GO:0046983 |
| Pfam | UDP-glucoronosyl and UDP-glucosyl transferase | 318 | 480 | GO:0008194 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00201.19 | 211 | 497 | UDP-glucuronosyl/UDP-glucosyltransferase | 1e-5 |
| PF05699.15 | 211 | 497 | UDP-glucuronosyl/UDP-glucosyltransferase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR012337 | SUPERFAMILY | 13 | 155 | Ribonuclease H-like superfamily |
| IPR008906 | Pfam | 77 | 166 | HAT, C-terminal dimerisation domain |
| IPR002213 | Pfam | 318 | 480 | UDP-glucuronosyl/UDP-glucosyltransferase |
| IPR035595 | ProSitePatterns | 379 | 422 | UDP-glycosyltransferase family, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028250025 | 97.449 | 588 | 0.0 |
| XM_028207517 | 95.578 | 588 | 0.0 |
| XM_028231294 | 95.833 | 552 | 0.0 |
| XM_028201767 | 95.833 | 552 | 0.0 |
| XM_028223531 | 96.256 | 454 | 0.0 |
| XM_028197247 | 96.296 | 270 | 8.54e-120 |
| XM_028223478 | 95.582 | 249 | 1.88e-106 |
| XM_028223471 | 95.536 | 224 | 1.15e-93 |
| XM_028208530 | 97.326 | 187 | 1.94e-81 |
| XM_028248326 | 95.385 | 195 | 9.04e-80 |
| XM_028215726 | 97.059 | 102 | 4.45e-38 |