Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR004242 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR004242 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00002126 |
| Cds Coordinates: | 14602388-14604164 |
| Nucleotide length: | 1776 |
| Prodicted protein length: | 430 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Cytochrome P450 | 28 | 426 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 100 | 423 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 28 | 99 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 285 | 303 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 372 | 395 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 56 | 75 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 80 | 101 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 326 | 350 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 362 | 372 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 233 | 250 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 286 | 297 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 363 | 372 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 365 | 374 | GO:0016705 |
| Gene3D | Cytochrome p450 | 18 | 427 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | SUPERFAMILY | 28 | 426 | Cytochrome P450 superfamily |
| IPR001128 | Pfam | 100 | 423 | Cytochrome P450 |
| IPR001128 | Pfam | 28 | 99 | Cytochrome P450 |
| IPR002401 | PRINTS | 285 | 303 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 372 | 395 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 56 | 75 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 80 | 101 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 326 | 350 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 362 | 372 | Cytochrome P450, E-class, group I |
| IPR001128 | PRINTS | 233 | 250 | Cytochrome P450 |
| IPR001128 | PRINTS | 286 | 297 | Cytochrome P450 |
| IPR001128 | PRINTS | 363 | 372 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 365 | 374 | Cytochrome P450, conserved site |
| IPR036396 | Gene3D | 18 | 427 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028229817 | 99.9 | 996 | 0.0 |
| XM_028229817 | 100 | 300 | 3.21e-153 |