Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR004286 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR004286 |
KEGG Orthology
Gene Family
Epimerase,GDP_Man_Dehyd,NmrA,NAD_binding_10,3Beta_HSD
Gene Attributes
| Chromosome: | GWHAMJR00002126 |
| Cds Coordinates: | 17208042-17212680 |
| Nucleotide length: | 4638 |
| Prodicted protein length: | 279 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 107 | 195 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 107 | 195 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 15 | 256 | NAD(P)-binding domain superfamily |
| IPR016040 | Pfam | 20 | 95 | NAD(P)-binding domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028251603 | 99.808 | 520 | 0.0 |
| XM_028251603 | 99.689 | 322 | 5.63e-164 |
| KY615691 | 99.615 | 520 | 0.0 |
| KY615691 | 99.689 | 322 | 5.63e-164 |