Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR004474 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR004474 |
KEGG Orthology
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | GWHAMJR00002126 |
| Cds Coordinates: | 29007125-29017951 |
| Nucleotide length: | 10826 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Gene3D | Aldolase class I | 104 | 204 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR013785 | Gene3D | 104 | 204 | Aldolase-type TIM barrel |
| IPR001480 | ProSiteProfiles | 253 | 318 | Bulb-type lectin domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028268334 | 96.439 | 337 | 1.41e-150 |
| XM_028268334 | 98.507 | 201 | 2.56e-93 |
| XM_028268332 | 96.439 | 337 | 1.41e-150 |
| XM_028268332 | 99.363 | 157 | 3.41e-72 |
| XM_028268331 | 96.439 | 337 | 1.41e-150 |
| XM_028268331 | 99.363 | 157 | 3.41e-72 |
| XM_028268333 | 99.583 | 240 | 2.47e-118 |
| XM_028268333 | 99.363 | 157 | 3.41e-72 |
| XM_028268333 | 100 | 100 | 3.55e-42 |
| XM_028268339 | 100 | 167 | 2.02e-79 |
| XM_028268339 | 99.363 | 157 | 3.41e-72 |
| XM_028268339 | 100 | 70 | 1.69e-25 |
| XM_028268338 | 99.412 | 170 | 2.02e-79 |
| XM_028268338 | 99.363 | 157 | 3.41e-72 |
| XM_028268338 | 100 | 100 | 3.55e-42 |
| XM_028268338 | 100 | 70 | 1.69e-25 |
| XM_028268337 | 100 | 167 | 2.02e-79 |
| XM_028268337 | 99.363 | 157 | 3.41e-72 |
| XM_028268337 | 100 | 70 | 1.69e-25 |
| XM_028268336 | 99.412 | 170 | 2.02e-79 |
| XM_028268336 | 99.363 | 157 | 3.41e-72 |
| XM_028268336 | 100 | 100 | 3.55e-42 |
| XM_028268336 | 100 | 70 | 1.69e-25 |
| XM_028268335 | 99.412 | 170 | 2.02e-79 |
| XM_028268335 | 99.363 | 157 | 3.41e-72 |
| XM_028268335 | 100 | 100 | 3.55e-42 |
| XM_028268335 | 100 | 70 | 1.69e-25 |
| XM_028213034 | 95.808 | 167 | 9.54e-68 |
| XM_028213034 | 97.143 | 70 | 3.66e-22 |
| XM_028213034 | 100 | 42 | 6.20e-10 |
| XM_028213033 | 95.808 | 167 | 9.54e-68 |
| XM_028213033 | 97.222 | 72 | 2.83e-23 |
| XM_028213033 | 100 | 42 | 6.20e-10 |
| XM_028213032 | 95.808 | 167 | 9.54e-68 |
| XM_028213032 | 97.143 | 70 | 3.66e-22 |
| XM_028213032 | 100 | 42 | 6.20e-10 |
| XM_028213031 | 95.808 | 167 | 9.54e-68 |
| XM_028213031 | 97.143 | 70 | 3.66e-22 |
| XM_028213031 | 100 | 42 | 6.20e-10 |
| XM_028213030 | 95.808 | 167 | 9.54e-68 |
| XM_028213030 | 97.222 | 72 | 2.83e-23 |
| XM_028213030 | 100 | 42 | 6.20e-10 |
| XM_028213029 | 95.808 | 167 | 9.54e-68 |
| XM_028213029 | 97.222 | 72 | 2.83e-23 |
| XM_028213029 | 100 | 42 | 6.20e-10 |
| XM_028213028 | 95.808 | 167 | 9.54e-68 |
| XM_028213028 | 97.222 | 72 | 2.83e-23 |
| XM_028213028 | 100 | 42 | 6.20e-10 |
| XM_028267841 | 95.031 | 161 | 9.60e-63 |
| XM_028267840 | 95.031 | 161 | 9.60e-63 |
| XR_003650022 | 95.726 | 117 | 2.75e-43 |
| XR_003650021 | 95.726 | 117 | 2.75e-43 |
| XR_003650020 | 95.726 | 117 | 2.75e-43 |
| XR_003650019 | 95.726 | 117 | 2.75e-43 |
| XR_003650018 | 95.726 | 117 | 2.75e-43 |
| XR_003650017 | 95.726 | 117 | 2.75e-43 |
| XR_003650016 | 95.726 | 117 | 2.75e-43 |
| XR_003650015 | 95.726 | 117 | 2.75e-43 |
| XR_003650014 | 95.726 | 117 | 2.75e-43 |
| XR_003650013 | 95.726 | 117 | 2.75e-43 |
| XR_003650012 | 95.726 | 117 | 2.75e-43 |
| XM_028209955 | 98 | 100 | 7.69e-39 |
| XM_028256070 | 97.959 | 98 | 9.95e-38 |
| XM_028256069 | 97.959 | 98 | 9.95e-38 |
| JX647693 | 97.959 | 98 | 9.95e-38 |
| AB297451 | 98.947 | 95 | 9.95e-38 |
| XM_028205684 | 97.917 | 96 | 1.29e-36 |
| JX647691 | 97.917 | 96 | 1.29e-36 |
| AB362886 | 97.917 | 96 | 1.29e-36 |
| AB207816 | 97.917 | 96 | 1.29e-36 |
| AB031281 | 97.917 | 96 | 1.29e-36 |
| JX647694 | 96.939 | 98 | 4.63e-36 |
| AB362882 | 97.895 | 95 | 4.63e-36 |
| MN163830 | 96.875 | 96 | 5.99e-35 |
| XM_028268989 | 96.875 | 96 | 5.99e-35 |
| XM_028205740 | 96.875 | 96 | 5.99e-35 |
| XM_028205701 | 96.875 | 96 | 5.99e-35 |
| AB207818 | 96.875 | 96 | 5.99e-35 |
| AB207817 | 96.875 | 96 | 5.99e-35 |
| AB056108 | 96.875 | 96 | 5.99e-35 |
| AY907710 | 96.875 | 96 | 5.99e-35 |
| JX647692 | 96.809 | 94 | 7.75e-34 |
| AB362885 | 95.833 | 96 | 2.79e-33 |
| AB362883 | 95.833 | 96 | 2.79e-33 |
| AB362884 | 95.789 | 95 | 1.00e-32 |