Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR005839 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR005839 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00002126 |
| Cds Coordinates: | 152082506-152086836 |
| Nucleotide length: | 4330 |
| Prodicted protein length: | 442 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Gene3D | Cytochrome p450 | 29 | 111 | GO:0005506|GO:0016705|GO:0020037 |
| Gene3D | Cytochrome p450 | 112 | 431 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 118 | 421 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 371 | 380 | GO:0016705 |
| PRINTS | E-class P450 group I signature | 289 | 307 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 378 | 401 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 66 | 85 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 368 | 378 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 330 | 354 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 40 | 432 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 237 | 254 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 290 | 301 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 369 | 378 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | Gene3D | 29 | 111 | Cytochrome P450 superfamily |
| IPR036396 | Gene3D | 112 | 431 | Cytochrome P450 superfamily |
| IPR001128 | Pfam | 118 | 421 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 371 | 380 | Cytochrome P450, conserved site |
| IPR002401 | PRINTS | 289 | 307 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 378 | 401 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 66 | 85 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 368 | 378 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 330 | 354 | Cytochrome P450, E-class, group I |
| IPR036396 | SUPERFAMILY | 40 | 432 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 237 | 254 | Cytochrome P450 |
| IPR001128 | PRINTS | 290 | 301 | Cytochrome P450 |
| IPR001128 | PRINTS | 369 | 378 | Cytochrome P450 |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028202917 | 99.9 | 1002 | 0.0 |
| XM_028202917 | 99.696 | 329 | 4.18e-167 |
| XM_028202916 | 99.9 | 1002 | 0.0 |
| XM_028202916 | 99.392 | 329 | 1.94e-165 |