Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR006967 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR006967 |
KEGG Orthology
Gene Family
Gln-synt_C
Gene Attributes
| Chromosome: | GWHAMJR00002126 |
| Cds Coordinates: | 225723401-225727963 |
| Nucleotide length: | 4562 |
| Prodicted protein length: | 132 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Glutamine synthetase/guanido kinase | 31 | 110 | GO:0003824 |
| Pfam | Glutamine synthetase, catalytic domain | 32 | 109 | GO:0004356|GO:0006807 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR014746 | SUPERFAMILY | 31 | 110 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR008146 | Pfam | 32 | 109 | Glutamine synthetase, catalytic domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256178 | 98.729 | 236 | 3.54e-113 |
| XM_028195971 | 98.723 | 235 | 1.27e-112 |
| XR_003647995 | 98.312 | 237 | 4.58e-112 |
| XR_003647995 | 98.462 | 65 | 1.87e-21 |
| XR_003647994 | 98.312 | 237 | 4.58e-112 |
| XR_003647994 | 96.97 | 99 | 1.83e-36 |
| XR_003647994 | 98.462 | 65 | 1.87e-21 |
| XR_003647993 | 98.312 | 237 | 4.58e-112 |
| XR_003647993 | 96.97 | 99 | 1.83e-36 |
| XR_003647993 | 98.462 | 65 | 1.87e-21 |
| XR_003647992 | 98.312 | 237 | 4.58e-112 |
| XR_003647992 | 98.462 | 65 | 1.87e-21 |
| XM_028262639 | 98.312 | 237 | 4.58e-112 |
| XM_028262639 | 98.462 | 65 | 1.87e-21 |
| XM_028262638 | 98.312 | 237 | 4.58e-112 |
| XM_028262638 | 98.462 | 65 | 1.87e-21 |
| XM_028262637 | 98.312 | 237 | 4.58e-112 |
| XM_028262637 | 98.462 | 65 | 1.87e-21 |
| XR_003648000 | 98.305 | 236 | 1.65e-111 |
| XR_003648000 | 96.97 | 99 | 1.83e-36 |
| XR_003648000 | 98.462 | 65 | 1.87e-21 |
| XR_003647999 | 98.305 | 236 | 1.65e-111 |
| XR_003647999 | 96.97 | 99 | 1.83e-36 |
| XR_003647999 | 98.462 | 65 | 1.87e-21 |
| XR_003647998 | 98.305 | 236 | 1.65e-111 |
| XR_003647998 | 96.97 | 99 | 1.83e-36 |
| XR_003647998 | 98.462 | 65 | 1.87e-21 |
| JQ925872 | 98.298 | 235 | 5.92e-111 |
| XR_003647996 | 98.291 | 234 | 2.13e-110 |
| XR_003647996 | 98.462 | 65 | 1.87e-21 |
| XR_003647997 | 98.206 | 223 | 2.77e-104 |
| XR_003647997 | 98.462 | 65 | 1.87e-21 |
| XR_003650626 | 96.186 | 236 | 3.59e-103 |
| XM_028268023 | 96.186 | 236 | 3.59e-103 |
| XM_028268023 | 98.611 | 72 | 2.40e-25 |
| XR_003640946 | 95.763 | 236 | 6.00e-101 |
| XR_003640945 | 95.763 | 236 | 6.00e-101 |
| XM_028236645 | 97.701 | 87 | 5.12e-32 |
| XM_028236644 | 97.701 | 87 | 5.12e-32 |
| XM_028236643 | 97.701 | 87 | 5.12e-32 |
| XR_003640162 | 97.222 | 72 | 1.12e-23 |
| XM_028257702 | 97.101 | 69 | 5.20e-22 |
| XR_003649940 | 96.226 | 53 | 1.47e-12 |
| XR_003627381 | 100 | 38 | 4.10e-08 |
| XR_003627380 | 100 | 38 | 4.10e-08 |