Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR007232 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR007232 |
KEGG Orthology
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | GWHAMJR00000425 |
| Cds Coordinates: | 1457111-1457665 |
| Nucleotide length: | 554 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | ARGININE DECARBOXYLASE | 70 | 145 | GO:0006527|GO:0008295|GO:0008792 |
| PANTHER | ARGININE DECARBOXYLASE | 15 | 71 | GO:0006527|GO:0008295|GO:0008792 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR029066 | Gene3D | 66 | 150 | PLP-binding barrel |
| IPR029066 | SUPERFAMILY | 58 | 146 | PLP-binding barrel |
| IPR002985 | PANTHER | 70 | 145 | Arginine decarboxylase |
| IPR002985 | PANTHER | 15 | 71 | Arginine decarboxylase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028210843 | 100 | 268 | 6.94e-136 |
| XM_028210843 | 100 | 212 | 9.36e-105 |
| XM_028248840 | 99.559 | 227 | 2.00e-111 |
| XM_028248840 | 99.405 | 168 | 1.25e-78 |
| XM_028269296 | 96.078 | 51 | 6.40e-12 |
| XM_028269295 | 96.078 | 51 | 6.40e-12 |
| XM_028226418 | 96.078 | 51 | 6.40e-12 |