Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR007900 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Peptidase S10--serine carboxypeptidase |
| Locus Name: | GWHPAMJR007900 |
Gene Family
Peptidase_S10
Gene Attributes
| Chromosome: | GWHAMJR00000425 |
| Cds Coordinates: | 25350414-25358843 |
| Nucleotide length: | 8429 |
| Prodicted protein length: | 293 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Serine carboxypeptidase | 106 | 194 | GO:0004185|GO:0006508 |
| Pfam | Serine carboxypeptidase | 210 | 289 | GO:0004185|GO:0006508 |
| Pfam | Serine carboxypeptidase | 46 | 105 | GO:0004185|GO:0006508 |
| PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 209 | 292 | GO:0004185|GO:0006508 |
| PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 20 | 108 | GO:0004185|GO:0006508 |
| PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 111 | 202 | GO:0004185|GO:0006508 |
Signal Peptide
SP(Sec/SPI)
CS pos:38-39.
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00450.23 | 26 | 288 | Peptidase S10--serine carboxypeptidase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR029058 | Gene3D | 38 | 107 | Alpha/Beta hydrolase fold |
| IPR029058 | Gene3D | 108 | 201 | Alpha/Beta hydrolase fold |
| IPR001563 | Pfam | 106 | 194 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | Pfam | 210 | 289 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | Pfam | 46 | 105 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 209 | 292 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 20 | 108 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 111 | 202 | Peptidase S10, serine carboxypeptidase |
| IPR029058 | SUPERFAMILY | 42 | 291 | Alpha/Beta hydrolase fold |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028223564 | 97.484 | 318 | 4.67e-150 |
| XM_028223564 | 96.443 | 253 | 2.96e-112 |
| XM_028223563 | 97.484 | 318 | 4.67e-150 |
| XM_028223563 | 96.443 | 253 | 2.96e-112 |
| KM289196 | 97.484 | 318 | 4.67e-150 |
| KM289196 | 96.047 | 253 | 1.38e-110 |
| XM_028240030 | 97.46 | 315 | 2.17e-148 |
| XM_028240030 | 96.541 | 318 | 4.71e-145 |
| XM_028240030 | 98.419 | 253 | 1.36e-120 |
| XM_028240029 | 97.46 | 315 | 2.17e-148 |
| XM_028240029 | 96.541 | 318 | 4.71e-145 |
| XM_028240029 | 98.419 | 253 | 1.36e-120 |
| KX267893 | 97.17 | 318 | 2.17e-148 |
| KX267893 | 96.838 | 253 | 6.35e-114 |
| XM_028223557 | 96.226 | 318 | 2.19e-143 |
| XM_028223557 | 96.443 | 253 | 2.96e-112 |