Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR007917 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Peptidase S10--serine carboxypeptidase |
| Locus Name: | GWHPAMJR007917 |
Gene Family
Peptidase_S10
Gene Attributes
| Chromosome: | GWHAMJR00000425 |
| Cds Coordinates: | 25999655-26005019 |
| Nucleotide length: | 5364 |
| Prodicted protein length: | 197 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Serine carboxypeptidase | 92 | 148 | GO:0004185|GO:0006508 |
| PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 87 | 148 | GO:0004185|GO:0006508 |
| PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 34 | 83 | GO:0004185|GO:0006508 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00450.23 | 92 | 148 | Peptidase S10--serine carboxypeptidase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR029058 | SUPERFAMILY | 83 | 148 | Alpha/Beta hydrolase fold |
| IPR001563 | Pfam | 92 | 148 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 87 | 148 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 34 | 83 | Peptidase S10, serine carboxypeptidase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028223536 | 100 | 215 | 2.55e-106 |
| XM_028223536 | 98.413 | 63 | 3.71e-20 |
| XM_028223539 | 97.753 | 178 | 4.41e-79 |
| XM_028223539 | 98.235 | 170 | 2.66e-76 |
| XM_028223539 | 100 | 38 | 6.30e-08 |
| XM_028223564 | 100 | 39 | 1.75e-08 |
| XM_028223563 | 100 | 39 | 1.75e-08 |
| KM289196 | 100 | 39 | 1.75e-08 |
| XM_028240030 | 100 | 39 | 1.75e-08 |
| XM_028240029 | 100 | 39 | 1.75e-08 |
| KX267893 | 100 | 39 | 1.75e-08 |
| XM_028223557 | 97.436 | 39 | 8.15e-07 |