Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR010271 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR010271 |
KEGG Orthology
Gene Family
Gln-synt_C
Gene Attributes
| Chromosome: | GWHAMJR00000425 |
| Cds Coordinates: | 190741421-190741639 |
| Nucleotide length: | 218 |
| Prodicted protein length: | 72 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Glutamine synthetase/guanido kinase | 1 | 69 | GO:0003824 |
| Pfam | Glutamine synthetase, catalytic domain | 1 | 70 | GO:0004356|GO:0006807 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR014746 | SUPERFAMILY | 1 | 69 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR008146 | Pfam | 1 | 70 | Glutamine synthetase, catalytic domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256178 | 96.347 | 219 | 1.11e-95 |
| XR_003648000 | 95.755 | 212 | 4.00e-90 |
| XR_003647999 | 95.755 | 212 | 4.00e-90 |
| XR_003647998 | 95.755 | 212 | 4.00e-90 |
| XR_003647997 | 95.755 | 212 | 4.00e-90 |
| XR_003647996 | 95.755 | 212 | 4.00e-90 |
| XR_003647995 | 95.755 | 212 | 4.00e-90 |
| XR_003647994 | 95.755 | 212 | 4.00e-90 |
| XR_003647993 | 95.755 | 212 | 4.00e-90 |
| XR_003647992 | 95.755 | 212 | 4.00e-90 |
| XM_028262639 | 95.755 | 212 | 4.00e-90 |
| XM_028262638 | 95.755 | 212 | 4.00e-90 |
| XM_028262637 | 95.755 | 212 | 4.00e-90 |
| XM_028195971 | 95.735 | 211 | 1.44e-89 |
| JQ925872 | 95.714 | 210 | 5.18e-89 |