Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR010321 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR010321 |
KEGG Orthology
Gene Family
RVT_2,Methyltransf_7
Gene Attributes
| Chromosome: | GWHAMJR00000425 |
| Cds Coordinates: | 195331592-195352464 |
| Nucleotide length: | 20872 |
| Prodicted protein length: | 760 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 599 | 663 | GO:0003824 |
| Pfam | SAM dependent carboxyl methyltransferase | 677 | 754 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR043502 | SUPERFAMILY | 1 | 343 | DNA/RNA polymerase superfamily |
| IPR036291 | SUPERFAMILY | 599 | 662 | NAD(P)-binding domain superfamily |
| IPR001509 | Pfam | 599 | 663 | NAD-dependent epimerase/dehydratase |
| IPR005299 | Pfam | 677 | 754 | SAM dependent carboxyl methyltransferase |
| IPR029063 | SUPERFAMILY | 678 | 754 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR013103 | Pfam | 1 | 162 | Reverse transcriptase, RNA-dependent DNA polymerase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028232148 | 95.041 | 242 | 1.33e-99 |
| XM_028260082 | 100 | 143 | 1.08e-65 |
| XM_028250659 | 96.454 | 141 | 3.05e-56 |
| XM_028250658 | 96.454 | 141 | 3.05e-56 |