Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR010396 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR010396 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00000425 |
| Cds Coordinates: | 199368677-199371528 |
| Nucleotide length: | 2851 |
| Prodicted protein length: | 495 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | GO:0016705 |
| PRINTS | P450 superfamily signature | 299 | 316 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 352 | 363 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 429 | 438 | GO:0005506|GO:0016705|GO:0020037 |
| Gene3D | Cytochrome p450 | 23 | 491 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 35 | 481 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 35 | 492 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 62 | 81 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 392 | 416 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 438 | 461 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 308 | 334 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 351 | 369 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 428 | 438 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR017972 | ProSitePatterns | 431 | 440 | Cytochrome P450, conserved site |
| IPR001128 | PRINTS | 299 | 316 | Cytochrome P450 |
| IPR001128 | PRINTS | 352 | 363 | Cytochrome P450 |
| IPR001128 | PRINTS | 429 | 438 | Cytochrome P450 |
| IPR036396 | Gene3D | 23 | 491 | Cytochrome P450 superfamily |
| IPR001128 | Pfam | 35 | 481 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 35 | 492 | Cytochrome P450 superfamily |
| IPR002401 | PRINTS | 62 | 81 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 392 | 416 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 438 | 461 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 308 | 334 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 351 | 369 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 428 | 438 | Cytochrome P450, E-class, group I |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028208855 | 98.867 | 1500 | 0.0 |
| XM_028208854 | 97.067 | 1500 | 0.0 |
| XM_028208853 | 97.067 | 1500 | 0.0 |