Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR011123 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR011123 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00001265 |
| Cds Coordinates: | 11658248-11660388 |
| Nucleotide length: | 2140 |
| Prodicted protein length: | 527 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Cytochrome P450 | 55 | 519 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 324 | 341 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 377 | 388 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 454 | 463 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 463 | 474 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 55 | 507 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 453 | 463 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 333 | 359 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 463 | 486 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 376 | 394 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 417 | 441 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 108 | 129 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 313 | 330 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 84 | 103 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | GO:0016705 |
| Gene3D | Cytochrome p450 | 44 | 520 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | SUPERFAMILY | 55 | 519 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 324 | 341 | Cytochrome P450 |
| IPR001128 | PRINTS | 377 | 388 | Cytochrome P450 |
| IPR001128 | PRINTS | 454 | 463 | Cytochrome P450 |
| IPR001128 | PRINTS | 463 | 474 | Cytochrome P450 |
| IPR001128 | Pfam | 55 | 507 | Cytochrome P450 |
| IPR002401 | PRINTS | 453 | 463 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 333 | 359 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 463 | 486 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 376 | 394 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 417 | 441 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 108 | 129 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 313 | 330 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 84 | 103 | Cytochrome P450, E-class, group I |
| IPR017972 | ProSitePatterns | 456 | 465 | Cytochrome P450, conserved site |
| IPR036396 | Gene3D | 44 | 520 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028209512 | 97.033 | 1584 | 0.0 |
| XM_023894351 | 96.078 | 51 | 8.06e-11 |