Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR014030 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR014030 |
KEGG Orthology
Gene Family
Epimerase
Gene Attributes
| Chromosome: | GWHAMJR00002815 |
| Cds Coordinates: | 38769862-38774246 |
| Nucleotide length: | 4384 |
| Prodicted protein length: | 192 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 11 | 112 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 11 | 112 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 2 | 187 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028199098 | 100 | 579 | 0.0 |
| GU944768 | 100 | 579 | 0.0 |
| MH236747 | 99.827 | 579 | 0.0 |
| GU992400 | 99.309 | 579 | 0.0 |
| KY615701 | 99.136 | 579 | 0.0 |
| AY641729 | 99.136 | 579 | 0.0 |
| MG925481 | 98.618 | 579 | 0.0 |
| HM003282 | 98.618 | 579 | 0.0 |