Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR014627 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR014627 |
KEGG Orthology
Gene Family
Epimerase,3Beta_HSD,GDP_Man_Dehyd,NAD_binding_10,NAD_binding_4,NmrA
Gene Attributes
| Chromosome: | GWHAMJR00002815 |
| Cds Coordinates: | 91037797-91042761 |
| Nucleotide length: | 4964 |
| Prodicted protein length: | 349 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | NAD dependent epimerase/dehydratase family | 24 | 270 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 24 | 270 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 19 | 341 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028242378 | 99.143 | 1050 | 0.0 |
| GU992402 | 99.042 | 1044 | 0.0 |
| KF879515 | 98.851 | 1044 | 0.0 |
| JN024667 | 98.851 | 1044 | 0.0 |
| KY615702 | 98.755 | 1044 | 0.0 |
| AY169404 | 98.663 | 1047 | 0.0 |
| MG925480 | 97.81 | 1050 | 0.0 |