Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR015394 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR015394 |
KEGG Orthology
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | GWHAMJR00002815 |
| Cds Coordinates: | 171052473-171056834 |
| Nucleotide length: | 4361 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR006968 | PANTHER | 22 | 152 | Root UVB sensitive family |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028234531 | 98.168 | 382 | 0.0 |
| XM_028270401 | 97.382 | 382 | 0.0 |
| XM_028270400 | 97.382 | 382 | 0.0 |
| XM_028270399 | 97.382 | 382 | 0.0 |
| XM_028270398 | 97.382 | 382 | 0.0 |
| XM_028219726 | 99.702 | 336 | 9.32e-172 |
| XM_028219726 | 100 | 74 | 8.84e-28 |
| XM_028219734 | 97.426 | 272 | 1.28e-125 |
| XM_028219734 | 100 | 126 | 1.10e-56 |
| XM_028195971 | 97.338 | 263 | 3.60e-121 |
| JQ925872 | 96.198 | 263 | 3.62e-116 |
| KY532105 | 96.552 | 174 | 2.31e-73 |
| XR_003634858 | 98.758 | 161 | 8.30e-73 |
| XR_003644422 | 98.758 | 161 | 8.30e-73 |
| XM_028204104 | 96.154 | 130 | 1.43e-50 |
| XM_028204460 | 95.385 | 130 | 6.65e-49 |
| XM_028246857 | 98.305 | 59 | 8.97e-18 |
| XM_028232598 | 98.148 | 54 | 5.40e-15 |
| XM_028232596 | 98.148 | 54 | 5.40e-15 |