Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR020108 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR020108 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00001415 |
| Cds Coordinates: | 104724403-104729842 |
| Nucleotide length: | 5439 |
| Prodicted protein length: | 461 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PRINTS | E-class P450 group I signature | 272 | 298 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 356 | 380 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 402 | 425 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 37 | 58 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 13 | 32 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 392 | 402 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 315 | 333 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 252 | 269 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 133 | 151 | GO:0005506|GO:0016705|GO:0020037 |
| Gene3D | Cytochrome p450 | 1 | 460 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 263 | 280 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 393 | 402 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 316 | 327 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 3 | 458 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 4 | 445 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 395 | 404 | GO:0016705 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR002401 | PRINTS | 272 | 298 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 356 | 380 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 402 | 425 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 37 | 58 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 13 | 32 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 392 | 402 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 315 | 333 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 252 | 269 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 133 | 151 | Cytochrome P450, E-class, group I |
| IPR036396 | Gene3D | 1 | 460 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 263 | 280 | Cytochrome P450 |
| IPR001128 | PRINTS | 393 | 402 | Cytochrome P450 |
| IPR001128 | PRINTS | 316 | 327 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 3 | 458 | Cytochrome P450 superfamily |
| IPR001128 | Pfam | 4 | 445 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 395 | 404 | Cytochrome P450, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028214335 | 98.918 | 1386 | 0.0 |
| XM_028254672 | 96.537 | 1386 | 0.0 |
| XM_028254671 | 96.537 | 1386 | 0.0 |
| XM_028264624 | 98.646 | 443 | 0.0 |
| XM_028207208 | 95.413 | 218 | 6.28e-91 |