Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR020497 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR020497 |
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | GWHAMJR00001415 |
| Cds Coordinates: | 121412057-121420847 |
| Nucleotide length: | 8790 |
| Prodicted protein length: | 207 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 2 | 131 | AMP-dependent synthetase/ligase |
| IPR042099 | Gene3D | 1 | 125 | AMP-dependent synthetase-like superfamily |
| IPR025110 | Pfam | 140 | 172 | AMP-binding enzyme, C-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615680 | 96.565 | 524 | 0.0 |
| KY615680 | 100 | 121 | 4.82e-54 |
| XM_028222930 | 96.374 | 524 | 0.0 |
| XM_028222930 | 100 | 121 | 4.82e-54 |