Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR023113 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR023113 |
KEGG Orthology
Gene Family
2OG-FeII_Oxy
Gene Attributes
| Chromosome: | GWHAMJR00002849 |
| Cds Coordinates: | 125733229-125743640 |
| Nucleotide length: | 10411 |
| Prodicted protein length: | 261 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 123 | 222 | GO:0016491 |
| Pfam | 2OG-Fe(II) oxygenase superfamily | 127 | 222 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 11 | 259 | Isopenicillin N synthase-like |
| IPR005123 | ProSiteProfiles | 123 | 222 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | Pfam | 127 | 222 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| FJ577509 | 99.746 | 786 | 0.0 |
| JF343560 | 98.982 | 786 | 0.0 |
| XM_028197260 | 98.728 | 786 | 0.0 |
| KY615706 | 98.473 | 786 | 0.0 |
| XM_028197259 | 98.625 | 582 | 0.0 |
| XM_028197259 | 98.14 | 215 | 1.60e-99 |