Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR023854 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR023854 |
Gene Family
Chal_sti_synt_N
Gene Attributes
| Chromosome: | GWHAMJR00002849 |
| Cds Coordinates: | 168749188-168752298 |
| Nucleotide length: | 3110 |
| Prodicted protein length: | 132 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Gene3D | - | 64 | 130 | GO:0016746 |
| SUPERFAMILY | Thiolase-like | 82 | 129 | GO:0016746 |
| PANTHER | HYDROXYMETHYLGLUTARYL-COA SYNTHASE | 79 | 127 | GO:0009058|GO:0016747 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016039 | Gene3D | 64 | 130 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 82 | 129 | Thiolase-like |
| IPR001099 | Pfam | 79 | 128 | Chalcone/stilbene synthase, N-terminal |
| IPR011141 | PANTHER | 79 | 127 | Polyketide synthase, type III |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| Null | Null | Null | Null |