Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR023898 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR023898 |
KEGG Orthology
Gene Family
Gln-synt_C
Gene Attributes
| Chromosome: | GWHAMJR00002849 |
| Cds Coordinates: | 171637599-171642245 |
| Nucleotide length: | 4646 |
| Prodicted protein length: | 134 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Glutamine synthetase/guanido kinase | 31 | 111 | GO:0003824 |
| Pfam | Glutamine synthetase, catalytic domain | 32 | 110 | GO:0004356|GO:0006807 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR014746 | SUPERFAMILY | 31 | 111 | Glutamine synthetase/guanido kinase, catalytic domain |
| IPR008146 | Pfam | 32 | 110 | Glutamine synthetase, catalytic domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XR_003647995 | 99.578 | 237 | 4.62e-117 |
| XR_003647995 | 98.718 | 78 | 4.06e-28 |
| XR_003647994 | 99.578 | 237 | 4.62e-117 |
| XR_003647994 | 98.99 | 99 | 8.59e-40 |
| XR_003647994 | 98.718 | 78 | 4.06e-28 |
| XR_003647993 | 99.578 | 237 | 4.62e-117 |
| XR_003647993 | 98.99 | 99 | 8.59e-40 |
| XR_003647993 | 98.718 | 78 | 4.06e-28 |
| XR_003647992 | 99.578 | 237 | 4.62e-117 |
| XR_003647992 | 98.718 | 78 | 4.06e-28 |
| XM_028262639 | 99.578 | 237 | 4.62e-117 |
| XM_028262639 | 98.718 | 78 | 4.06e-28 |
| XM_028262638 | 99.578 | 237 | 4.62e-117 |
| XM_028262638 | 98.718 | 78 | 4.06e-28 |
| XM_028262637 | 99.578 | 237 | 4.62e-117 |
| XM_028262637 | 98.718 | 78 | 4.06e-28 |
| XR_003648000 | 99.576 | 236 | 1.66e-116 |
| XR_003648000 | 98.99 | 99 | 8.59e-40 |
| XR_003648000 | 98.718 | 78 | 4.06e-28 |
| XR_003647999 | 99.576 | 236 | 1.66e-116 |
| XR_003647999 | 98.99 | 99 | 8.59e-40 |
| XR_003647999 | 98.718 | 78 | 4.06e-28 |
| XR_003647998 | 99.576 | 236 | 1.66e-116 |
| XR_003647998 | 98.99 | 99 | 8.59e-40 |
| XR_003647998 | 98.718 | 78 | 4.06e-28 |
| XR_003647996 | 99.573 | 234 | 2.15e-115 |
| XR_003647996 | 98.718 | 78 | 4.06e-28 |
| XM_028256178 | 98.305 | 236 | 1.67e-111 |
| XR_003647997 | 99.552 | 223 | 2.80e-109 |
| XR_003647997 | 98.718 | 78 | 4.06e-28 |
| XM_028195971 | 97.447 | 235 | 1.30e-107 |
| JQ925872 | 97.021 | 235 | 6.06e-106 |
| XR_003650626 | 95.763 | 236 | 1.70e-101 |
| XM_028268023 | 95.763 | 236 | 1.70e-101 |
| XM_028268023 | 98.485 | 66 | 1.90e-21 |
| XR_003640946 | 95.339 | 236 | 2.84e-99 |
| XR_003640945 | 95.339 | 236 | 2.84e-99 |
| XM_028257702 | 98.462 | 65 | 6.83e-21 |
| XR_003640162 | 96.97 | 66 | 8.84e-20 |
| XM_028264548 | 95.385 | 65 | 1.48e-17 |
| XR_003649940 | 97.959 | 49 | 1.49e-12 |
| XR_003627381 | 97.368 | 38 | 1.94e-06 |
| XR_003627380 | 97.368 | 38 | 1.94e-06 |