Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR024861 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR024861 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00002848 |
| Cds Coordinates: | 10949551-10953271 |
| Nucleotide length: | 3720 |
| Prodicted protein length: | 434 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PRINTS | P450 superfamily signature | 372 | 383 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 233 | 250 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 363 | 372 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 286 | 297 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 3 | 414 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 242 | 268 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 372 | 395 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 18 | 39 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 285 | 303 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 326 | 350 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 222 | 239 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 362 | 372 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 2 | 428 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 365 | 374 | GO:0016705 |
| Gene3D | Cytochrome p450 | 1 | 431 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001128 | PRINTS | 372 | 383 | Cytochrome P450 |
| IPR001128 | PRINTS | 233 | 250 | Cytochrome P450 |
| IPR001128 | PRINTS | 363 | 372 | Cytochrome P450 |
| IPR001128 | PRINTS | 286 | 297 | Cytochrome P450 |
| IPR001128 | Pfam | 3 | 414 | Cytochrome P450 |
| IPR002401 | PRINTS | 242 | 268 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 372 | 395 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 18 | 39 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 285 | 303 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 326 | 350 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 222 | 239 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 362 | 372 | Cytochrome P450, E-class, group I |
| IPR036396 | SUPERFAMILY | 2 | 428 | Cytochrome P450 superfamily |
| IPR017972 | ProSitePatterns | 365 | 374 | Cytochrome P450, conserved site |
| IPR036396 | Gene3D | 1 | 431 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028265980 | 97.625 | 1305 | 0.0 |
| XM_028232948 | 95.872 | 1308 | 0.0 |
| XM_028257115 | 95.724 | 912 | 0.0 |
| XM_028232949 | 96.352 | 795 | 0.0 |
| XM_028244918 | 97.249 | 618 | 0.0 |