Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR026203 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR026203 |
KEGG Orthology
Gene Family
ELFV_dehydrog_N,ELFV_dehydrog
Gene Attributes
| Chromosome: | GWHAMJR00002848 |
| Cds Coordinates: | 84718520-84720226 |
| Nucleotide length: | 1706 |
| Prodicted protein length: | 265 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 142 | 262 | GO:0006520|GO:0016491 |
| SMART | ELFV_dehydrog_3 | 144 | 265 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 175 | 195 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 133 | 155 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 54 | 68 | GO:0006520|GO:0016491 |
| Pfam | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 3 | 124 | GO:0006520|GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR006096 | Pfam | 142 | 262 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR006096 | SMART | 144 | 265 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR033524 | ProSitePatterns | 62 | 75 | Leu/Phe/Val dehydrogenases active site |
| IPR006095 | PRINTS | 175 | 195 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 133 | 155 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 54 | 68 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR036291 | SUPERFAMILY | 142 | 262 | NAD(P)-binding domain superfamily |
| IPR006097 | Pfam | 3 | 124 | Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028236779 | 99.49 | 785 | 0.0 |
| XM_028254452 | 99.237 | 786 | 0.0 |
| XM_028254451 | 99.237 | 786 | 0.0 |
| XM_028254450 | 99.237 | 786 | 0.0 |
| XM_028254449 | 99.237 | 786 | 0.0 |
| XM_028254448 | 99.237 | 786 | 0.0 |
| XM_028254446 | 99.237 | 786 | 0.0 |
| XM_028254453 | 99.361 | 782 | 0.0 |
| XM_028236780 | 99.251 | 668 | 0.0 |