Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR026773 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | CTP synthase |
| Locus Name: | GWHPAMJR026773 |
KEGG Orthology
Gene Family
CTP_synth_N
Gene Attributes
| Chromosome: | GWHAMJR00002848 |
| Cds Coordinates: | 151487135-151502421 |
| Nucleotide length: | 15286 |
| Prodicted protein length: | 265 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | CTP synthase N-terminus | 140 | 167 | GO:0003883|GO:0006221 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF06418.15 | 141 | 167 | CTP synthase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027417 | SUPERFAMILY | 140 | 168 | P-loop containing nucleoside triphosphate hydrolase |
| IPR017456 | Pfam | 140 | 167 | CTP synthase, N-terminal |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028213141 | 95.041 | 121 | 2.28e-43 |
| XM_028213140 | 95.041 | 121 | 2.28e-43 |
| XR_003642038 | 96.471 | 85 | 6.46e-29 |
| XR_003642037 | 96.429 | 84 | 2.33e-28 |
| XR_003642036 | 96.429 | 84 | 2.33e-28 |
| XR_003633800 | 96.341 | 82 | 3.01e-27 |