Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR026872 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR026872 |
KEGG Orthology
Gene Family
ELFV_dehydrog,ELFV_dehydrog_N
Gene Attributes
| Chromosome: | GWHAMJR00002848 |
| Cds Coordinates: | 159462021-159469409 |
| Nucleotide length: | 7388 |
| Prodicted protein length: | 374 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| CDD | NAD_bind_1_Glu_DH | 176 | 365 | GO:0016639 |
| PIRSF | Glu_DH | 1 | 175 | GO:0016639 |
| PIRSF | Glu_DH | 175 | 374 | GO:0016639 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 90 | 104 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 299 | 310 | GO:0006520|GO:0016491 |
| Pfam | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 176 | 371 | GO:0006520|GO:0016491 |
| Pfam | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 35 | 161 | GO:0006520|GO:0016491 |
| SMART | ELFV_dehydrog_3 | 139 | 371 | GO:0006520|GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR033922 | CDD | 176 | 365 | NAD(P) binding domain of glutamate dehydrogenase |
| IPR036291 | SUPERFAMILY | 158 | 372 | NAD(P)-binding domain superfamily |
| IPR014362 | PIRSF | 1 | 175 | Glutamate dehydrogenase |
| IPR014362 | PIRSF | 175 | 374 | Glutamate dehydrogenase |
| IPR006095 | PRINTS | 90 | 104 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 299 | 310 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006096 | Pfam | 176 | 371 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR006097 | Pfam | 35 | 161 | Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain |
| IPR006096 | SMART | 139 | 371 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028247449 | 99.5 | 600 | 0.0 |
| XM_028247449 | 99.437 | 533 | 0.0 |
| XM_028247393 | 99.5 | 600 | 0.0 |
| XM_028247393 | 99.344 | 305 | 1.00e-152 |
| XM_028247393 | 99.561 | 228 | 1.37e-111 |
| EU715396 | 99 | 600 | 0.0 |
| EU715396 | 98.672 | 527 | 0.0 |
| JN602372 | 99.712 | 347 | 9.65e-178 |