Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR027333 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR027333 |
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | GWHAMJR00002848 |
| Cds Coordinates: | 191362206-191369740 |
| Nucleotide length: | 7534 |
| Prodicted protein length: | 553 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR042099 | Gene3D | 23 | 453 | AMP-dependent synthetase-like superfamily |
| IPR025110 | Pfam | 459 | 534 | AMP-binding enzyme, C-terminal domain |
| IPR020845 | ProSitePatterns | 211 | 222 | AMP-binding, conserved site |
| IPR000873 | Pfam | 53 | 454 | AMP-dependent synthetase/ligase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028196719 | 99.853 | 1364 | 0.0 |
| XM_028196719 | 100 | 302 | 3.21e-154 |
| KY615679 | 99.487 | 1364 | 0.0 |
| KY615679 | 100 | 302 | 3.21e-154 |
| DQ194356 | 98.388 | 1365 | 0.0 |
| DQ194356 | 98.693 | 306 | 1.16e-148 |
| XR_003645807 | 100 | 181 | 5.89e-87 |