Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR030368 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR030368 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00000102 |
| Cds Coordinates: | 68835257-68840797 |
| Nucleotide length: | 5540 |
| Prodicted protein length: | 435 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Cytochrome P450 | 2 | 419 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 107 | 125 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 366 | 376 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 226 | 243 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 330 | 354 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 376 | 399 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 289 | 307 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 11 | 32 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 246 | 272 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 369 | 378 | GO:0016705 |
| Gene3D | Cytochrome p450 | 1 | 433 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 290 | 301 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 367 | 376 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 237 | 254 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 2 | 432 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001128 | Pfam | 2 | 419 | Cytochrome P450 |
| IPR002401 | PRINTS | 107 | 125 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 366 | 376 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 226 | 243 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 330 | 354 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 376 | 399 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 289 | 307 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 11 | 32 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 246 | 272 | Cytochrome P450, E-class, group I |
| IPR017972 | ProSitePatterns | 369 | 378 | Cytochrome P450, conserved site |
| IPR036396 | Gene3D | 1 | 433 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 290 | 301 | Cytochrome P450 |
| IPR001128 | PRINTS | 367 | 376 | Cytochrome P450 |
| IPR001128 | PRINTS | 237 | 254 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 2 | 432 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028214335 | 99.159 | 1308 | 0.0 |
| XM_028254672 | 96.56 | 1308 | 0.0 |
| XM_028254671 | 96.56 | 1308 | 0.0 |
| XM_028259408 | 95.106 | 613 | 0.0 |
| XM_028264624 | 98.871 | 443 | 0.0 |