Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR030527 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR030527 |
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | GWHAMJR00000102 |
| Cds Coordinates: | 79658270-79668387 |
| Nucleotide length: | 10117 |
| Prodicted protein length: | 544 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR020845 | ProSitePatterns | 195 | 206 | AMP-binding, conserved site |
| IPR042099 | Gene3D | 10 | 441 | AMP-dependent synthetase-like superfamily |
| IPR000873 | Pfam | 35 | 446 | AMP-dependent synthetase/ligase |
| IPR025110 | Pfam | 455 | 530 | AMP-binding enzyme, C-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028249324 | 99.817 | 1635 | 0.0 |
| MH981229 | 99.755 | 1635 | 0.0 |