Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR031410 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Peptidase S10--serine carboxypeptidase |
| Locus Name: | GWHPAMJR031410 |
Gene Family
Peptidase_S10
Gene Attributes
| Chromosome: | GWHAMJR00000102 |
| Cds Coordinates: | 123135494-123140558 |
| Nucleotide length: | 5064 |
| Prodicted protein length: | 174 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Serine carboxypeptidase | 48 | 85 | GO:0004185|GO:0006508 |
| PANTHER | NUCLEOID-ASSOCIATED PROTEIN YBAB | 126 | 168 | GO:0003677 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00450.23 | 48 | 85 | Peptidase S10--serine carboxypeptidase | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001563 | Pfam | 48 | 85 | Peptidase S10, serine carboxypeptidase |
| IPR004401 | PANTHER | 126 | 168 | Nucleoid-associated protein YbaB/EbfC family |
| IPR029058 | Gene3D | 41 | 95 | Alpha/Beta hydrolase fold |
| IPR029058 | SUPERFAMILY | 48 | 86 | Alpha/Beta hydrolase fold |
| IPR036894 | SUPERFAMILY | 125 | 166 | Nucleoid-associated protein YbaB-like domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028223257 | 99.59 | 244 | 7.86e-121 |
| XM_028249636 | 96.774 | 155 | 3.95e-64 |
| XM_028219599 | 95.918 | 147 | 1.85e-57 |
| XM_028219598 | 95.918 | 147 | 1.85e-57 |
| XM_028219597 | 95.918 | 147 | 1.85e-57 |
| XR_003634699 | 95.918 | 147 | 1.85e-57 |
| XM_028219596 | 95.918 | 147 | 1.85e-57 |
| XR_003634698 | 95.918 | 147 | 1.85e-57 |
| XR_003634697 | 95.918 | 147 | 1.85e-57 |
| XM_028219595 | 95.918 | 147 | 1.85e-57 |
| XM_028198108 | 95.918 | 147 | 1.85e-57 |
| XM_028198107 | 95.918 | 147 | 1.85e-57 |