Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR033356 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR033356 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00002298 |
| Cds Coordinates: | 135332746-135336096 |
| Nucleotide length: | 3350 |
| Prodicted protein length: | 348 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Gene3D | Cytochrome p450 | 14 | 337 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 37 | 330 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 279 | 288 | GO:0016705 |
| PRINTS | E-class P450 group I signature | 198 | 216 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 239 | 263 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 276 | 286 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 135 | 152 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 286 | 309 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 155 | 181 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 37 | 340 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 146 | 163 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 286 | 297 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 277 | 286 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 199 | 210 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | Gene3D | 14 | 337 | Cytochrome P450 superfamily |
| IPR001128 | Pfam | 37 | 330 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 279 | 288 | Cytochrome P450, conserved site |
| IPR002401 | PRINTS | 198 | 216 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 239 | 263 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 276 | 286 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 135 | 152 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 286 | 309 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 155 | 181 | Cytochrome P450, E-class, group I |
| IPR036396 | SUPERFAMILY | 37 | 340 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 146 | 163 | Cytochrome P450 |
| IPR001128 | PRINTS | 286 | 297 | Cytochrome P450 |
| IPR001128 | PRINTS | 277 | 286 | Cytochrome P450 |
| IPR001128 | PRINTS | 199 | 210 | Cytochrome P450 |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028271861 | 95.89 | 949 | 0.0 |
| XM_028195279 | 95.68 | 625 | 0.0 |