Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR033372 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR033372 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00002298 |
| Cds Coordinates: | 136256897-136261671 |
| Nucleotide length: | 4774 |
| Prodicted protein length: | 537 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Cytochrome P450 | 65 | 520 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 65 | 529 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 387 | 398 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 475 | 486 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 466 | 475 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 334 | 351 | GO:0005506|GO:0016705|GO:0020037 |
| Gene3D | Cytochrome p450 | 50 | 533 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 468 | 477 | GO:0016705 |
| PRINTS | E-class P450 group I signature | 92 | 111 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 323 | 340 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 386 | 404 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 427 | 451 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 465 | 475 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 208 | 226 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 343 | 369 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 116 | 137 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 475 | 498 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001128 | Pfam | 65 | 520 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 65 | 529 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 387 | 398 | Cytochrome P450 |
| IPR001128 | PRINTS | 475 | 486 | Cytochrome P450 |
| IPR001128 | PRINTS | 466 | 475 | Cytochrome P450 |
| IPR001128 | PRINTS | 334 | 351 | Cytochrome P450 |
| IPR036396 | Gene3D | 50 | 533 | Cytochrome P450 superfamily |
| IPR017972 | ProSitePatterns | 468 | 477 | Cytochrome P450, conserved site |
| IPR002401 | PRINTS | 92 | 111 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 323 | 340 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 386 | 404 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 427 | 451 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 465 | 475 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 208 | 226 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 343 | 369 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 116 | 137 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 475 | 498 | Cytochrome P450, E-class, group I |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028271868 | 99.071 | 1614 | 0.0 |
| XM_028234269 | 96.821 | 975 | 0.0 |
| XM_028234270 | 96.615 | 975 | 0.0 |
| XM_028242422 | 97.927 | 627 | 0.0 |