Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR033424 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR033424 |
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
| Chromosome: | GWHAMJR00002298 |
| Cds Coordinates: | 138364439-138369787 |
| Nucleotide length: | 5348 |
| Prodicted protein length: | 389 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 204 | 303 | GO:0016491 |
| Pfam | 2OG-Fe(II) oxygenase superfamily | 207 | 303 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR026992 | Pfam | 50 | 146 | Non-haem dioxygenase N-terminal domain |
| IPR027443 | Gene3D | 5 | 336 | Isopenicillin N synthase-like |
| IPR005123 | ProSiteProfiles | 204 | 303 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | Pfam | 207 | 303 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| Null | Null | Null | Null |