Data Related Infomation

Camellia sinensis var. sinensis cv. Biyun                  GWHPAMJR035100                   SCAU CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   GWHPAMJR035100

KEGG Orthology

K05658  K05277  

Gene Family

2OG-FeII_Oxy,DIOX_N

Gene Attributes

Chromosome:GWHAMJR00000250
Cds Coordinates:74586907-74588694
Nucleotide length:1787
Prodicted protein length:355

Gene Ontology Classification

Database Annotation Match Start Match End GO
ProSiteProfilesFe(2+) 2-oxoglutarate dioxygenase domain profile.211310GO:0016491
Pfam2OG-Fe(II) oxygenase superfamily214310GO:0016491

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR027443Gene3D5352Isopenicillin N synthase-like
IPR005123ProSiteProfiles211310Oxoglutarate/iron-dependent dioxygenase
IPR026992Pfam50163Non-haem dioxygenase N-terminal domain
IPR005123Pfam214310Oxoglutarate/iron-dependent dioxygenase

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
KR90274699.71910680.0
MN26648499.53210680.0
MN86423199.53210680.0
KY61570498.68910680.0
JN94457798.68910680.0
XM_02821692499.399830.0
MG68652598.6628220.0
MG68653098.4188220.0
MG68652698.4188220.0
MG68653198.1758220.0
MG68652798.1758220.0
MG68653297.9328220.0
MG68652897.9328220.0
MG68652997.818220.0
MG68653397.6898220.0
MG68653497.4458220.0
MG68653597.3248220.0
MG68653697.088220.0
MG68653796.9598220.0
MG68653896.8378220.0
MG68653996.5948220.0
AB52488698.9324680.0