Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR035102 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | No Gene Product Found |
Locus Name: | GWHPAMJR035102 |
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
Chromosome: | GWHAMJR00000250 |
Cds Coordinates: | 74803592-74805743 |
Nucleotide length: | 2151 |
Prodicted protein length: | 344 |
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
Pfam | 2OG-Fe(II) oxygenase superfamily | 203 | 299 | GO:0016491 |
ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 200 | 299 | GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Name | Match Start | Match End | E-value |
---|---|---|---|---|
Null | Null | Null | Null | Null |
Interpro hits
Interpro Accession | Name | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR005123 | Pfam | 203 | 299 | Oxoglutarate/iron-dependent dioxygenase |
IPR027443 | Gene3D | 5 | 341 | Isopenicillin N synthase-like |
IPR005123 | ProSiteProfiles | 200 | 299 | Oxoglutarate/iron-dependent dioxygenase |
IPR026992 | Pfam | 50 | 156 | Non-haem dioxygenase N-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
MN266484 | 100 | 564 | 0.0 |
MN266484 | 99.371 | 477 | 0.0 |
MN864231 | 100 | 564 | 0.0 |
MN864231 | 99.371 | 477 | 0.0 |
KR902746 | 99.291 | 564 | 0.0 |
KR902746 | 98.952 | 477 | 0.0 |
MG686526 | 98.759 | 564 | 0.0 |
MG686526 | 96.97 | 231 | 9.84e-103 |
MG686525 | 98.759 | 564 | 0.0 |
MG686525 | 97.835 | 231 | 4.55e-106 |
MG686530 | 98.582 | 564 | 0.0 |
MG686530 | 97.403 | 231 | 2.12e-104 |
KY615704 | 98.582 | 564 | 0.0 |
KY615704 | 98.742 | 477 | 0.0 |
JN944577 | 98.582 | 564 | 0.0 |
JN944577 | 98.742 | 477 | 0.0 |
MG686527 | 98.404 | 564 | 0.0 |
MG686527 | 96.97 | 231 | 9.84e-103 |
MG686532 | 98.227 | 564 | 0.0 |
MG686532 | 96.537 | 231 | 4.58e-101 |
MG686531 | 98.227 | 564 | 0.0 |
MG686531 | 97.403 | 231 | 2.12e-104 |
MG686529 | 98.227 | 564 | 0.0 |
MG686529 | 96.104 | 231 | 2.13e-99 |
MG686528 | 98.227 | 564 | 0.0 |
MG686528 | 96.537 | 231 | 4.58e-101 |
MG686533 | 97.872 | 564 | 0.0 |
MG686533 | 96.537 | 231 | 4.58e-101 |
MG686534 | 97.695 | 564 | 0.0 |
MG686534 | 96.104 | 231 | 2.13e-99 |
MG686535 | 97.518 | 564 | 0.0 |
MG686535 | 96.104 | 231 | 2.13e-99 |
MG686537 | 97.34 | 564 | 0.0 |
MG686537 | 95.671 | 231 | 9.91e-98 |
MG686536 | 97.34 | 564 | 0.0 |
MG686536 | 95.671 | 231 | 9.91e-98 |
MG686538 | 97.163 | 564 | 0.0 |
MG686538 | 95.671 | 231 | 9.91e-98 |
MG686539 | 96.809 | 564 | 0.0 |
MG686539 | 95.671 | 231 | 9.91e-98 |
XM_028216924 | 100 | 479 | 0.0 |
XM_028216924 | 99.371 | 477 | 0.0 |
AB524886 | 99.015 | 406 | 0.0 |