Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR036319 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR036319 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00000980 |
| Cds Coordinates: | 6014051-6019210 |
| Nucleotide length: | 5159 |
| Prodicted protein length: | 510 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SUPERFAMILY | Cytochrome P450 | 38 | 502 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 294 | 311 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 437 | 447 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 314 | 340 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 398 | 422 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 89 | 110 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 183 | 201 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 357 | 375 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 65 | 84 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 447 | 470 | GO:0005506|GO:0016705|GO:0020037 |
| Gene3D | Cytochrome p450 | 25 | 500 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 358 | 369 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 305 | 322 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 438 | 447 | GO:0005506|GO:0016705|GO:0020037 |
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | GO:0016705 |
| Pfam | Cytochrome P450 | 38 | 490 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036396 | SUPERFAMILY | 38 | 502 | Cytochrome P450 superfamily |
| IPR002401 | PRINTS | 294 | 311 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 437 | 447 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 314 | 340 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 398 | 422 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 89 | 110 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 183 | 201 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 357 | 375 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 65 | 84 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 447 | 470 | Cytochrome P450, E-class, group I |
| IPR036396 | Gene3D | 25 | 500 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 358 | 369 | Cytochrome P450 |
| IPR001128 | PRINTS | 305 | 322 | Cytochrome P450 |
| IPR001128 | PRINTS | 438 | 447 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 440 | 449 | Cytochrome P450, conserved site |
| IPR001128 | Pfam | 38 | 490 | Cytochrome P450 |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KP347677 | 99.282 | 1533 | 0.0 |
| KY615696 | 99.217 | 1533 | 0.0 |
| AY945842 | 99.217 | 1533 | 0.0 |
| XM_028255056 | 98.7 | 1539 | 0.0 |
| DQ194358 | 98.436 | 1535 | 0.0 |
| KY852429 | 99.794 | 1458 | 0.0 |
| JX898767 | 99.778 | 900 | 0.0 |
| KX792116 | 99.667 | 900 | 0.0 |
| KX792116 | 99.058 | 637 | 0.0 |
| CP025650 | 95.122 | 41 | 7.85e-06 |