Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR036329 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR036329 |
KEGG Orthology
Gene Family
No Gene Family Found
Gene Attributes
| Chromosome: | GWHAMJR00000980 |
| Cds Coordinates: | 7245265-7259316 |
| Nucleotide length: | 14051 |
| Prodicted protein length: |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR039884 | PANTHER | 6 | 359 | Coiled-coil domain-containing protein R3HC1/R3HCL |
| IPR012677 | Gene3D | 205 | 290 | Nucleotide-binding alpha-beta plait domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028270222 | 97.664 | 1113 | 0.0 |
| XM_028270221 | 97.664 | 1113 | 0.0 |
| XM_028270223 | 96.852 | 826 | 0.0 |
| XM_028270223 | 100 | 249 | 6.03e-125 |
| MK795755 | 96.723 | 824 | 0.0 |
| MK795755 | 99.598 | 249 | 2.80e-123 |
| XR_003647273 | 95.498 | 311 | 4.59e-136 |
| XM_028260149 | 95.498 | 311 | 4.59e-136 |
| XM_028260148 | 95.498 | 311 | 4.59e-136 |
| XR_003628393 | 96.117 | 103 | 4.09e-37 |
| XR_003628393 | 97.059 | 68 | 5.41e-21 |