Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR038543 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR038543 |
KEGG Orthology
Gene Family
p450
Gene Attributes
| Chromosome: | GWHAMJR00002491 |
| Cds Coordinates: | 27929401-27940508 |
| Nucleotide length: | 11107 |
| Prodicted protein length: | 518 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | GO:0016705 |
| Gene3D | Cytochrome p450 | 26 | 513 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 453 | 476 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 319 | 345 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 362 | 380 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 299 | 316 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 403 | 427 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 443 | 453 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 63 | 82 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | E-class P450 group I signature | 87 | 108 | GO:0005506|GO:0016705|GO:0020037 |
| Pfam | Cytochrome P450 | 36 | 494 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 363 | 374 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 310 | 327 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 444 | 453 | GO:0005506|GO:0016705|GO:0020037 |
| PRINTS | P450 superfamily signature | 453 | 464 | GO:0005506|GO:0016705|GO:0020037 |
| SUPERFAMILY | Cytochrome P450 | 28 | 510 | GO:0005506|GO:0016705|GO:0020037 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR017972 | ProSitePatterns | 446 | 455 | Cytochrome P450, conserved site |
| IPR036396 | Gene3D | 26 | 513 | Cytochrome P450 superfamily |
| IPR002401 | PRINTS | 453 | 476 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 319 | 345 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 362 | 380 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 299 | 316 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 403 | 427 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 443 | 453 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 63 | 82 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 87 | 108 | Cytochrome P450, E-class, group I |
| IPR001128 | Pfam | 36 | 494 | Cytochrome P450 |
| IPR001128 | PRINTS | 363 | 374 | Cytochrome P450 |
| IPR001128 | PRINTS | 310 | 327 | Cytochrome P450 |
| IPR001128 | PRINTS | 444 | 453 | Cytochrome P450 |
| IPR001128 | PRINTS | 453 | 464 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 28 | 510 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028256484 | 99.936 | 1557 | 0.0 |
| KY615695 | 99.807 | 1557 | 0.0 |
| KP347675 | 99.358 | 1557 | 0.0 |
| KT180309 | 99.294 | 1557 | 0.0 |
| GQ438849 | 99.037 | 1557 | 0.0 |
| KR902747 | 98.908 | 1557 | 0.0 |
| HQ290518 | 97.431 | 1557 | 0.0 |