Data Related Infomation
Camellia sinensis var. sinensis cv. Biyun GWHPAMJR039267 SCAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPAMJR039267 |
Gene Family
AMP-binding
Gene Attributes
| Chromosome: | GWHAMJR00002491 |
| Cds Coordinates: | 90050573-90056185 |
| Nucleotide length: | 5612 |
| Prodicted protein length: | 463 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation/i> |
|---|---|---|---|---|
| IPR042099 | Gene3D | 29 | 430 | AMP-dependent synthetase-like superfamily |
| IPR000873 | Pfam | 34 | 436 | AMP-dependent synthetase/ligase |
| IPR020845 | ProSitePatterns | 180 | 191 | AMP-binding, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615678 | 99.227 | 1293 | 0.0 |
| XM_028215194 | 99.215 | 1147 | 0.0 |
| XM_028215194 | 98.947 | 95 | 5.27e-37 |
| XM_028251405 | 98.202 | 445 | 0.0 |
| XM_028251405 | 95.279 | 233 | 4.84e-97 |