Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB000642 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB000642 |
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | GWHABKB00000001 |
| Cds Coordinates: | 63892218-63896084 |
| Nucleotide length: | 3866 |
| Prodicted protein length: | 210 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 125 | 141 | GO:0016841 |
| SUPERFAMILY | L-aspartase-like | 19 | 204 | GO:0003824 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001106 | PANTHER | 21 | 201 | Aromatic amino acid lyase |
| IPR022313 | ProSitePatterns | 125 | 141 | Phenylalanine/histidine ammonia-lyases, active site |
| IPR008948 | SUPERFAMILY | 19 | 204 | L-Aspartase-like |
| IPR001106 | Pfam | 19 | 204 | Aromatic amino acid lyase |
| IPR024083 | Gene3D | 16 | 189 | Fumarase/histidase, N-terminal |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN207178 | 98.736 | 633 | 0.0 |
| XM_028255247 | 98.578 | 633 | 0.0 |
| KY615670 | 98.262 | 633 | 0.0 |