Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB000868 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB000868 |
Gene Family
ELFV_dehydrog_N,ELFV_dehydrog
Gene Attributes
| Chromosome: | GWHABKB00000001 |
| Cds Coordinates: | 87724606-87731089 |
| Nucleotide length: | 6483 |
| Prodicted protein length: | 358 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| SMART | ELFV_dehydrog_3 | 182 | 355 | GO:0006520|GO:0016491 |
| PIRSF | Glu_DH | 240 | 358 | GO:0016639 |
| PIRSF | Glu_DH | 1 | 183 | GO:0016639 |
| Pfam | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | 33 | 159 | GO:0006520|GO:0016491 |
| Pfam | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | 244 | 355 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 283 | 294 | GO:0006520|GO:0016491 |
| PRINTS | Glutamate/leucine/phenylalanine/valine dehydrogenase signature | 88 | 102 | GO:0006520|GO:0016491 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR006096 | SMART | 182 | 355 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR014362 | PIRSF | 240 | 358 | Glutamate dehydrogenase |
| IPR014362 | PIRSF | 1 | 183 | Glutamate dehydrogenase |
| IPR033524 | ProSitePatterns | 96 | 109 | Leu/Phe/Val dehydrogenases active site |
| IPR036291 | SUPERFAMILY | 243 | 356 | NAD(P)-binding domain superfamily |
| IPR006097 | Pfam | 33 | 159 | Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain |
| IPR006096 | Pfam | 244 | 355 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR006095 | PRINTS | 283 | 294 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 88 | 102 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028266987 | 99.616 | 521 | 0.0 |
| XM_028266987 | 98.86 | 351 | 5.55e-175 |
| XM_028266987 | 99.153 | 118 | 6.63e-50 |