Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB001726 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB001726 |
Gene Family
Methyltransf_7
Gene Attributes
| Chromosome: | GWHABKB00000001 |
| Cds Coordinates: | 196551251-196554438 |
| Nucleotide length: | 3187 |
| Prodicted protein length: | 289 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 208 | 270 | GO:0008168 |
| PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 3 | 201 | GO:0008168 |
| Pfam | SAM dependent carboxyl methyltransferase | 207 | 272 | GO:0008168 |
| Pfam | SAM dependent carboxyl methyltransferase | 38 | 201 | GO:0008168 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR042086 | Gene3D | 206 | 255 | Methyltransferase, alpha-helical capping domain |
| IPR005299 | PANTHER | 208 | 270 | SAM dependent carboxyl methyltransferase |
| IPR042086 | Gene3D | 108 | 201 | Methyltransferase, alpha-helical capping domain |
| IPR005299 | PANTHER | 3 | 201 | SAM dependent carboxyl methyltransferase |
| IPR005299 | Pfam | 207 | 272 | SAM dependent carboxyl methyltransferase |
| IPR005299 | Pfam | 38 | 201 | SAM dependent carboxyl methyltransferase |
| IPR029063 | SUPERFAMILY | 4 | 272 | S-adenosyl-L-methionine-dependent methyltransferase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| AB362883 | 97.172 | 495 | 0.0 |
| AB362883 | 97.768 | 224 | 8.22e-103 |
| AB362883 | 97 | 100 | 3.24e-37 |
| AB362886 | 96.122 | 490 | 0.0 |
| AB362884 | 95.918 | 490 | 0.0 |
| AB362885 | 95.714 | 490 | 0.0 |
| AB362885 | 97.321 | 224 | 3.82e-101 |
| AB362885 | 95.192 | 104 | 4.19e-36 |
| AB297451 | 95.714 | 490 | 0.0 |
| AB297451 | 96.154 | 104 | 9.01e-38 |
| AB362882 | 95.306 | 490 | 0.0 |
| AB362882 | 95.192 | 104 | 4.19e-36 |
| AB056108 | 95.102 | 490 | 0.0 |
| JX647692 | 99.275 | 276 | 1.01e-136 |
| JX647692 | 99.556 | 225 | 4.88e-110 |
| JX647692 | 98.174 | 219 | 1.06e-101 |
| JX647692 | 100 | 104 | 1.92e-44 |
| JX647693 | 95.833 | 216 | 1.08e-91 |
| XM_028268334 | 96.341 | 82 | 3.29e-27 |
| XM_028268332 | 96.341 | 82 | 3.29e-27 |
| XM_028268331 | 96.341 | 82 | 3.29e-27 |