Data Related Infomation
Camellia sinensis Wild Tea(DASZ) GWHPABKB003315 HZAU CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPABKB003315 |
Gene Family
FAE1_CUT1_RppA,ACP_syn_III_C,Chal_sti_synt_C
Gene Attributes
| Chromosome: | GWHABKB00000001 |
| Cds Coordinates: | 327447587-327451664 |
| Nucleotide length: | 4077 |
| Prodicted protein length: | 514 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| PIRSF | Very_long_ch_3-ktacl-CoA_syn | 22 | 514 | GO:0006633|GO:0016020|GO:0016747 |
| Gene3D | - | 106 | 482 | GO:0016746 |
| Pfam | FAE1/Type III polyketide synthase-like protein | 95 | 383 | GO:0006633|GO:0016020|GO:0016747 |
| PANTHER | 3-KETOACYL-COA SYNTHASE | 15 | 510 | GO:0006633|GO:0016020|GO:0016747 |
| SUPERFAMILY | Thiolase-like | 312 | 482 | GO:0016746 |
| SUPERFAMILY | Thiolase-like | 89 | 306 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR012392 | PIRSF | 22 | 514 | Very-long-chain 3-ketoacyl-CoA synthase |
| IPR016039 | Gene3D | 106 | 482 | Thiolase-like |
| IPR013601 | Pfam | 95 | 383 | FAE1/Type III polyketide synthase-like protein |
| IPR012392 | PANTHER | 15 | 510 | Very-long-chain 3-ketoacyl-CoA synthase |
| IPR016039 | SUPERFAMILY | 312 | 482 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 89 | 306 | Thiolase-like |
| IPR013747 | Pfam | 401 | 481 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028270915 | 99.482 | 1545 | 0.0 |
| MK350293 | 99.417 | 1545 | 0.0 |
| MK370067 | 99.288 | 1545 | 0.0 |